STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorAIsoquinoline 1-oxidoreductase alpha subunit. (173 aa)    
Predicted Functional Partners:
BAV1532
Putative salicylate hydroxylase; Start codon not provided.
  
 
 0.997
BAV1527
Probable aldehyde dehydrogenase.
 0.996
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
 
 0.991
cutL-2
Putative carbon monoxide dehydrogenase large subunit.
 
 0.987
cutL
Carbon monoxide dehydrogenase large chain.
 
 0.984
cutM-2
Carbon monoxide dehydrogenase medium chain.
 
 0.932
BAV2487
Putative exported protein.
   
    0.920
pncA
Pyrazinamidase/nicotinamidase.
    
  0.916
pncB
Pututative nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
    
  0.901
cutM
Carbon monoxide dehydrogenase medium chain; Start codon not provided.
 
 
 0.896
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.