STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1536MarR-family transcriptional regulator. (155 aa)    
Predicted Functional Partners:
BAV2746
MarR-family transcriptional regulator.
  
     0.729
BAV2742
Conserved hypothetical protein.
  
  
 0.621
BAV1529
Conserved hypothetical protein.
  
  
 0.617
BAV0548
MarR-family transcriptional regulator.
  
     0.607
maiA2
Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
  
   
 0.604
maiA1
Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
  
   
 0.603
BAV2743
Probable hydrolase.
  
     0.587
BAV1530
Putative alpha/beta hydrolase.
  
     0.566
BAV1528
Probable hydrolase.
 
   
 0.473
BAV2741
Putative isochorismatase-family hydrolase.
 
   
 0.437
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.