BAV1562 protein (Bordetella avium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BAV1562

ABC transporter, permease protein. (301 aa)

Predicted Functional Partners:

BAV1561

0.982

BAV1560

0.975

BAV1563

0.963

BAV1559

0.938

BAV3205

0.923

BAV2801

0.914

appD

0.904

BAV3206

0.889

BAV2800

0.870

BAV2803

0.842

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV1559	BAV1560	BAV1559	BAV1560	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.819
BAV1559	BAV1561	BAV1559	BAV1561	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.825
BAV1559	BAV1562	BAV1559	BAV1562	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.938
BAV1559	BAV1563	BAV1559	BAV1563	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.938
BAV1559	BAV2803	BAV1559	BAV2803	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.740
BAV1560	BAV1559	BAV1560	BAV1559	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, substrate binding protein.	0.819
BAV1560	BAV1561	BAV1560	BAV1561	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.815
BAV1560	BAV1562	BAV1560	BAV1562	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.975
BAV1560	BAV1563	BAV1560	BAV1563	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.945
BAV1560	BAV2803	BAV1560	BAV2803	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.636
BAV1561	BAV1559	BAV1561	BAV1559	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, substrate binding protein.	0.825
BAV1561	BAV1560	BAV1561	BAV1560	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.815
BAV1561	BAV1562	BAV1561	BAV1562	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.982
BAV1561	BAV1563	BAV1561	BAV1563	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.955
BAV1561	BAV2803	BAV1561	BAV2803	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.745
BAV1562	BAV1559	BAV1562	BAV1559	ABC transporter, permease protein.	ABC transporter, substrate binding protein.	0.938
BAV1562	BAV1560	BAV1562	BAV1560	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.975
BAV1562	BAV1561	BAV1562	BAV1561	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.982
BAV1562	BAV1563	BAV1562	BAV1563	ABC transporter, permease protein.	ABC transporter, permease protein.	0.963
BAV1562	BAV2800	BAV1562	BAV2800	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.870