BAV1563 protein (Bordetella avium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

BAV1563

ABC transporter, permease protein. (324 aa)

Predicted Functional Partners:

BAV1562

0.963

BAV1561

0.955

BAV1560

0.945

BAV1559

0.938

BAV2802

0.842

BAV3339

0.842

BAV3204

0.834

appC

0.823

BAV0499

0.819

BAV1646

0.819

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV0499	BAV1559	BAV0499	BAV1559	Putative ABC transporter permease protein.	ABC transporter, substrate binding protein.	0.464
BAV0499	BAV1560	BAV0499	BAV1560	Putative ABC transporter permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.806
BAV0499	BAV1561	BAV0499	BAV1561	Putative ABC transporter permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.813
BAV0499	BAV1563	BAV0499	BAV1563	Putative ABC transporter permease protein.	ABC transporter, permease protein.	0.819
BAV1559	BAV0499	BAV1559	BAV0499	ABC transporter, substrate binding protein.	Putative ABC transporter permease protein.	0.464
BAV1559	BAV1560	BAV1559	BAV1560	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.819
BAV1559	BAV1561	BAV1559	BAV1561	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.825
BAV1559	BAV1562	BAV1559	BAV1562	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.938
BAV1559	BAV1563	BAV1559	BAV1563	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.938
BAV1559	BAV1646	BAV1559	BAV1646	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.466
BAV1559	BAV2802	BAV1559	BAV2802	ABC transporter, substrate binding protein.	ABC transporter permease protein.	0.671
BAV1559	BAV3204	BAV1559	BAV3204	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.774
BAV1559	BAV3339	BAV1559	BAV3339	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.696
BAV1559	appC	BAV1559	BAV0999	ABC transporter, substrate binding protein.	Putative oligopeptide ABC transporter, permease protein.	0.459
BAV1560	BAV0499	BAV1560	BAV0499	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	Putative ABC transporter permease protein.	0.806
BAV1560	BAV1559	BAV1560	BAV1559	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, substrate binding protein.	0.819
BAV1560	BAV1561	BAV1560	BAV1561	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.815
BAV1560	BAV1562	BAV1560	BAV1562	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.975
BAV1560	BAV1563	BAV1560	BAV1563	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.945
BAV1560	BAV1646	BAV1560	BAV1646	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, permease protein.	0.846