STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1566Conserved hypothetical protein. (183 aa)    
Predicted Functional Partners:
BAV2570
Conserved hypothetical protein.
     0.775
BAV1564
Putative monooxygenase; Also weakly similar to Escherichia coli L-lysine 6-monooxygenase iucD SWALL:IUCD_ECOLI (SWALL:P11295) (425 aa) fasta scores: E(): 0.19, 24.13 38d in 290 aa.
 
     0.490
BAV2216
Conserved hypothetical protein.
  
     0.489
BAV2214
Conserved hypothetical protein.
  
     0.484
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.482
BAV1557
Conserved hypothetical protein.
 
     0.448
BAV1565
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.427
BAV1560
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.424
BAV1561
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.424
BAV1562
ABC transporter, permease protein.
       0.424
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.