STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1581Putative dioxygenase system, ferredoxin component. (102 aa)    
Predicted Functional Partners:
BAV1582
Putative dioxygenase system, reductase component.
 0.994
BAV0660
Putative ferredoxin reductase.
 0.986
BAV2072
Putative ferredoxin reductase.
 0.983
fpr
ferredoxin--NADP reductase.
   
 
 0.905
fpr-2
ferredoxin--NADP reductase.
   
 
 0.905
BAV1583
Putative dioxygenase system, alpha subunit.
   
 0.900
cysG
Siroheme synthase includes: uroporphyrin-iii c-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.829
BAV1584
Putative dioxygenase system, beta subunit.
 
  
 0.815
BAV0262
Putative bifunctional protein: include phospholipase and oxidoreductase.
 
 
 0.676
BAV0657
Putative oxygenase (small subunit).
 
  
 0.640
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.