STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1584Putative dioxygenase system, beta subunit. (174 aa)    
Predicted Functional Partners:
BAV1583
Putative dioxygenase system, alpha subunit.
 
 0.997
BAV0658
Putative oxygenase (large subunit).
 
 0.993
BAV0659
Ferredoxin.
 
 
 0.939
BAV2745
Probable decarboxylase.
  
  
  0.939
BAV0657
Putative oxygenase (small subunit).
  
  
 
0.911
BAV3020
2-aminobenzoate-CoA ligase.
     
 0.901
BAV1581
Putative dioxygenase system, ferredoxin component.
 
  
 0.815
BAV0609
Putative iron-sulphur containing oxygenase.
 
 
 0.745
BAV3080
Putative dioxygenase.
  
 
 0.720
BAV2180
Putative dioxygenase.
  
 
 0.714
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.