STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1607Putative phage excisionase. (138 aa)    
Predicted Functional Partners:
BAV1606
Putative carboxylesterase.
 
     0.892
BAV1199
Hypothetical protein (partial); Start codon not provided; Partial CDS. Similar to the C-terminal regions of severals including bordetellae putative transcriptional regulators.
  
     0.566
BAV1609
ArsR-family transcriptional regulator.
 
     0.513
BAV1608
Putative sugar efflux transporter.
       0.450
BAV1605
Putative membrane protein.
       0.444
BAV2557
ArsR-family transcriptional regulator.
  
     0.408
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.