STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1624Putative acetyltransferase. (237 aa)    
Predicted Functional Partners:
wlbJK
Putative membrane protein.
   
 
 0.558
BAV1623
GntR-family transcriptional regulator.
       0.544
bvgS
Virulence sensor protein; Start codon not provided.
   
 
 0.526
amiC
N-acetylmuramoyl-L-alanine amidase; Start codon not provided.
      0.522
argA
Amino-acid acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.513
BAV1067
Putative acetyltransferase.
  
 
 0.505
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.481
BAV0671
Acetyltransferase.
  
   0.434
gltB
Glutamate synthase [NADPH] large chain precursor.
  
  
 0.424
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.413
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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