STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1625Putative thioredoxin. (111 aa)    
Predicted Functional Partners:
dltD
Putative D-alanine transferase.
  
     0.731
wlbJK
Putative membrane protein.
  
 
 0.728
BAV3224
Putative thioredoxin reductase.
 
 
 0.723
putA
Bifunctional PutA protein [includes: proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 
 0.721
BAV1105
Putative outer membrane protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
   0.686
BAV2171
Conserved hypothetical protein; Start codon not provided.
  
     0.674
BAV2363
Type IV pilus assembly protein.
  
     0.674
BAV0495
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0496, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
     0.670
BAV3287
Putative membrane protein; Start codon not provided.
  
     0.643
BAV1526
Putative membrane protein.
 
   
 0.636
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.