STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1661Two-component response regulator. (208 aa)    
Predicted Functional Partners:
BAV1662
Two-component sensor kinase.
 
 
 0.983
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
    0.892
bvgS
Virulence sensor protein; Start codon not provided.
 
 
 
 0.810
prlC
Oligopeptidase A.
       0.714
wlbJK
Putative membrane protein.
   
 
 0.680
cheR-2
Chemotaxis protein methyltransferase; Start codon not provided.
    
 0.639
BAV1658
Putative electron transport protein.
       0.594
dctB
Two component sensor kinase for C4-dicarboxylate transport; Start codon not provided.
 
 
 0.593
BAV2311
Two-component system sensor kinase.
 
 
 
 0.534
BAV2908
Two-component response regulator.
  
   
 0.528
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.