STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheYChemotaxis two-component response regulator. (126 aa)    
Predicted Functional Partners:
cheA-2
Chemotaxis two-cpmponent sensor kinase.
 
 0.988
cheW-2
Chemotaxis protein.
 
 
 0.952
cheY-2
Chemotaxis response regulator.
 
  
 
0.949
cheZ
Chemotaxis protein; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
 
 0.945
BAV1677
Methyl-accepting chemotaxis protein.
 
  0.924
fliN
Flagellar motor switch protein.
   
 0.909
BAV1703
Methyl-accepting chemotaxis protein; Start codon not provided.
 
 0.886
BAV1702
Methyl-accepting chemotaxis protein.
  
  0.860
BAV1699
Methyl-accepting chemotaxis protein.
  
  0.858
BAV1700
Methyl-accepting chemotaxis protein.
  
  0.858
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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