Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAV1677 | BAV1699 | BAV1677 | BAV1699 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.903 |
BAV1677 | BAV1702 | BAV1677 | BAV1702 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.903 |
BAV1677 | cheA | BAV1677 | BAV1024 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.904 |
BAV1677 | cheA-2 | BAV1677 | BAV1675 | Methyl-accepting chemotaxis protein. | Chemotaxis two-cpmponent sensor kinase. | 0.998 |
BAV1677 | cheB-2 | BAV1677 | BAV1679 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.995 |
BAV1677 | cheD | BAV1677 | BAV3061 | Methyl-accepting chemotaxis protein. | Putative chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.979 |
BAV1677 | cheR-2 | BAV1677 | BAV1678 | Methyl-accepting chemotaxis protein. | Chemotaxis protein methyltransferase; Start codon not provided. | 0.996 |
BAV1677 | cheW-2 | BAV1677 | BAV1676 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.995 |
BAV1677 | cheY | BAV1677 | BAV1674 | Methyl-accepting chemotaxis protein. | Chemotaxis two-component response regulator. | 0.979 |
BAV1677 | cheY-2 | BAV1677 | BAV1680 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator. | 0.984 |
BAV1699 | BAV1677 | BAV1699 | BAV1677 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.903 |
BAV1699 | BAV1702 | BAV1699 | BAV1702 | Methyl-accepting chemotaxis protein. | Methyl-accepting chemotaxis protein. | 0.931 |
BAV1699 | cheA | BAV1699 | BAV1024 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.908 |
BAV1699 | cheA-2 | BAV1699 | BAV1675 | Methyl-accepting chemotaxis protein. | Chemotaxis two-cpmponent sensor kinase. | 0.991 |
BAV1699 | cheB-2 | BAV1699 | BAV1679 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.983 |
BAV1699 | cheD | BAV1699 | BAV3061 | Methyl-accepting chemotaxis protein. | Putative chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.979 |
BAV1699 | cheR-2 | BAV1699 | BAV1678 | Methyl-accepting chemotaxis protein. | Chemotaxis protein methyltransferase; Start codon not provided. | 0.983 |
BAV1699 | cheW-2 | BAV1699 | BAV1676 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.988 |
BAV1699 | cheY | BAV1699 | BAV1674 | Methyl-accepting chemotaxis protein. | Chemotaxis two-component response regulator. | 0.960 |
BAV1699 | cheY-2 | BAV1699 | BAV1680 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator. | 0.939 |
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