STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliTFlagellar protein. (115 aa)    
Predicted Functional Partners:
fliD
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
 
 0.983
fliS
Flagellar protein.
  
  
 0.976
BAV1720
Hypothetical protein.
 
   
 0.888
BAV1719
Putative flagellar biosynthesis protein.
  
    0.847
fliJ
Flagellar protein; Start codon not provided.
  
 
 0.784
BAV1718
Hypothetical protein; No significant database matches.
       0.782
flgK
Flagellar hook-associated protein 1.
   
  
 0.757
BAV1186
Conserved hypothetical protein.
  
     0.745
flgL
Flagellar hook-associated protein 3.
  
 
 0.726
BAV2536
Putative exported protein (partial); Partial CDS. truncated at N-terminus.
  
     0.725
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.