Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fliTFlagellar protein. (115 aa)    
Predicted Functional Partners:
fliS
Flagellar protein.
  
  
 0.982
fliD
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
 
 0.951
BAV1720
Hypothetical protein.
 
   
 0.894
BAV1719
Putative flagellar biosynthesis protein.
  
    0.860
BAV1718
Hypothetical protein; No significant database matches.
       0.780
flgK
Flagellar hook-associated protein 1.
   
  
 0.778
fliJ
Flagellar protein; Start codon not provided.
  
 
 0.751
BAV1186
Conserved hypothetical protein.
  
     0.745
BAV2536
Putative exported protein (partial); Partial CDS. truncated at N-terminus.
  
     0.725
BAV2409
Putative membrane protein; Start codon not provided.
  
     0.709
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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