STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1758acyl-CoA dehydrogenase; Start codon not provided. (384 aa)    
Predicted Functional Partners:
BAV1759
enoly-CoA hydratase.
 
 0.949
phbB-2
acetoacetyl-CoA reductase; Start codon not provided; Similar to N-terminal half of Escherichia coli probable 3-hydroxybutyryl-coa dehydrogenase paaH SWALL:PAAH_ECOLI (SWALL:P76083) (475 aa) fasta scores: E(): 5.4e-15, 30.79 38d in 328 aa.
  
 0.861
mmsB
3-hydroxyisobutyrate dehydrogenase; Also similar to BAV2903 (35.2 38d); Belongs to the HIBADH-related family.
 
  
 0.808
BAV3222
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.797
etfA1
Electron transfer flavoprotein alpha-subunit; Also similar to BAV3266 (81.9).
 
 0.788
dcaE
enoyl-CoA hydratase.
 
 0.788
BAV3262
Electron transfer flavoprotein alpha-subunit.
 
 0.775
BAV2554
Putative beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.698
BAV3370
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.698
etfA2
Electron transfer flavoprotein alpha-subunit; Also similar to BAV1365 (75.4).
 
 0.667
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.