STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1790Putative cointegrate resolution protein. (354 aa)    
Predicted Functional Partners:
BAV1791
Integrase; Belongs to the 'phage' integrase family.
 
   
 0.874
BAV1618
Conserved hypothetical protein.
  
 
   0.653
BAV2827
Multidrug resistance protein; Start codon not provided.
  
     0.594
BAV1526
Putative membrane protein.
 
    0.541
BAV1789
Putative signaling protein; Its C-terminal region is similar to the C-terminal region of Pseudomonas putida regulator MorA.
       0.522
BAV3049
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.522
BAV1235
Conserved hypothetical protein.
  
 
 
 0.515
BAV2248
Conserved hypothetical protein.
  
 
 0.506
wlbJK
Putative membrane protein.
   
 
 0.502
BAV1234
ABC transporter, permease and ATP-binding protein.
  
 
 
 0.500
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.