STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1806Cytochrome c family protein. (302 aa)    
Predicted Functional Partners:
adhB
Alcohol dehydrogenase cytochrome c subunit.
 
 
 0.977
BAV3247
Putative cytochrome C subunit of gluconate dehydrogenase.
 
 
 0.860
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
 
 
 0.844
BAV3403
Putative dehydrogenase, cytochrome C subunit.
 
 
 0.823
BAV1807
Hypothetical protein; Start codon not provided; No significant database matches.
       0.773
BAV0067
Putative cytochrome C.
  
 0.764
msrP
Conserved hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R [...]
   
 
 0.652
cyoA
Ubiquinol oxidase polypeptide II; Start codon not provided.
   
 
 0.623
BAV0111
Putative dehydrogenase.
   
 
 0.523
betA
Choline dehydrogenase.
   
 
 0.523
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.