STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1812Outer membrane efflux protein. (472 aa)    
Predicted Functional Partners:
BAV1813
Putative HlyD-family secretion protein.
  
 
 0.874
acrB
Acriflavine resistance protein B (multidrug efflux system transmembrane protein).
 
 0.828
acrA
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.811
BAV2462
Multidrug efflux system inner membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.808
BAV1814
ABC transporter ATP-binding protein.
     
 0.799
BAV1815
ABC transporter, permease protein.
     
 0.788
BAV2461
Multidrug efflux system transmembrane protein.
 
 0.774
macB
Putative macrolide-specific ABC-type efflux carrier; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.667
BAV0326
HlyD-family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.663
BAV0325
Multidrug efflux system transmembrane protein.
 
 0.660
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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