STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1824Putative transcriptional regulator. (329 aa)    
Predicted Functional Partners:
BAV3379
Putative membrane protein.
  
     0.675
BAV0388
Hypothetical protein.
  
     0.643
BAV2615
Putative poly(aspartic acid) hydrolase.
  
     0.625
kgtP
Alpha-ketoglutarate permease.
 
     0.608
BAV1804
Putative lipoprotein; No significant database matches.
  
     0.558
amnA
2-aminophenol 1,6-dioxygenase alpha subunit.
  
     0.534
BAV1949
Putative two-component sensor histidine kinase.
  
     0.520
BAV2948
Conserved hypothetical protein.
  
     0.507
aat
Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor.
  
     0.495
amnB
2-aminophenol 1,6-dioxygenase beta subunit.
  
     0.464
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.