STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1831Conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
BAV1625
Putative thioredoxin.
  
 
   0.578
BAV1832
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.532
BAV2266
Putative membrane protein.
 
     0.495
wlbJK
Putative membrane protein.
  
  
 0.478
BAV1835
Putative lipoprotein.
 
     0.469
BAV2839
Putative alginate lyase.
  
     0.465
BAV0535
Putative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
 
    0.456
BAV0790
Putative cell wall degrading peptidase.
   
 
 0.436
BAV3335
Putative membrane protein.
  
     0.426
BAV3003
Putative membrane protein; Start codon not provided.
 
    0.418
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.