STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV1832Glutathione peroxidase; Belongs to the glutathione peroxidase family. (164 aa)    
Predicted Functional Partners:
BAV1973
Putative antioxidant.
  
 0.970
gor
Glutathione reductase.
  
 0.941
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.933
BAV0828
Putative antioxidant; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.932
BAV2143
Glutathione transferase.
  
 
 0.914
gst
Glutathione S-transferase; Belongs to the GST superfamily.
   
 
 0.908
BAV0077
Putative glutathione S-transferase.
   
 
 0.907
ggt
Gamma-glutamyltranspeptidase.
     
 0.907
BAV0871
Conserved hypothetical protein (pseudogene).
   
 
 0.907
ggt-2
Putative gamma-glutamyltranspeptidase.
     
 0.907
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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