STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1846Putative monooxygenase. (329 aa)    
Predicted Functional Partners:
BAV1850
ABC transporter, periplasmic binding protein.
 
     0.909
ssuE
FMN reductase; Start codon not provided.
 
 
 0.899
BAV1845
Putative monooxygenase.
 
    
0.841
BAV1848
ABC transporter, permease protein.
 
     0.819
BAV1844
Putative monooxygenase; Start codon not provided.
 
   
 0.817
BAV1849
ABC transporter, permease protein.
 
     0.796
BAV1847
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.789
BAV0038
Putative reductase.
 
 
 0.511
BAV1851
PadR-family transcriptional regulator.
       0.458
BAV1852
Conserved hypothetical protein.
       0.440
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.