STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1850ABC transporter, periplasmic binding protein. (526 aa)    
Predicted Functional Partners:
BAV1848
ABC transporter, permease protein.
 
   0.953
BAV1849
ABC transporter, permease protein.
 
   0.946
BAV1845
Putative monooxygenase.
 
     0.914
BAV1846
Putative monooxygenase.
 
     0.909
BAV1847
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 0.787
BAV1844
Putative monooxygenase; Start codon not provided.
 
     0.782
ssuE
FMN reductase; Start codon not provided.
 
     0.666
BAV1646
ABC transporter, permease protein.
  
   0.593
BAV1161
ABC transporter permease protein.
  
   0.580
BAV1645
ABC transporter, permease protein.
  
   0.568
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.