STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfeAFerric enterobactin receptor. (735 aa)    
Predicted Functional Partners:
bfeB
Putative ferric-enterobactin hydrolase.
 
  
 0.966
bfeR
Enterobactin-dependent positive regulator (AraC-family transcriptional regulator); Start codon not provided.
 
   
 0.842
hurR
Heme uptake transmembrane sensor.
 
  
 0.840
BAV0634
Ferric-siderophore receptor.
  
  
 0.818
tonB
Siderophore-mediated iron transport protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.763
BAV3003
Putative membrane protein; Start codon not provided.
 
 
 0.756
bvgS
Virulence sensor protein; Start codon not provided.
 
   
 0.698
BAV1572
Phage integrase (pseudogene); Unassigned protein domain.
 
 
 0.621
BAV0191
Putative transferrin/hemoglobin-binding protein.
 
  
 0.609
bhuU
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.568
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.