STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV1861Putative membrane protein. (152 aa)    
Predicted Functional Partners:
BAV1862
Putative membrane protein.
 
  
 0.940
BAV2901
Putative membrane protein.
  
  
 
0.922
BAV2755
Putative exported protein.
 
  
 0.786
BAV0238
Putative exported protein.
 
  
 0.784
BAV0735
Putative exported protein.
 
  
 0.761
BAV3054
Putative exported protein.
 
  
 0.758
BAV3128
Putative exported protein.
 
  
 0.749
BAV0620
Putative exported protein.
 
  
 0.745
BAV0213
Putative exported protein.
 
  
 0.739
BAV0192
Putative exported protein.
 
  
 0.730
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.