STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1861Putative membrane protein. (152 aa)    
Predicted Functional Partners:
BAV1862
Putative membrane protein.
 
  
 0.943
BAV0238
Putative exported protein.
 
  
 0.780
BAV2755
Putative exported protein.
 
  
 0.780
BAV0735
Putative exported protein.
 
  
 0.757
BAV3054
Putative exported protein.
 
  
 0.754
BAV3128
Putative exported protein.
 
  
 0.744
BAV0620
Putative exported protein.
 
  
 0.741
BAV0213
Putative exported protein.
 
  
 0.734
BAV0192
Putative exported protein.
 
  
 0.725
BAV0958
Putative exported protein.
 
  
 0.718
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.