BAV1867 protein (Bordetella avium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

BAV1867

ABC transporter, solute-binding protein. (252 aa)

Predicted Functional Partners:

BAV1866

0.988

BAV1865

0.945

glnP

0.862

BAV0680

0.847

BAV0679

0.823

BAV0678

0.798

glnQ

0.794

BAV0898

0.722

aapP

0.679

aapM

0.551

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV0678	BAV0679	BAV0678	BAV0679	Amino acid ABC transporter, atp-binding protein.	Amino acid ABC transporter, permease protein.	0.972
BAV0678	BAV0680	BAV0678	BAV0680	Amino acid ABC transporter, atp-binding protein.	Amino acid ABC transporter, permease protein.	0.969
BAV0678	BAV1866	BAV0678	BAV1866	Amino acid ABC transporter, atp-binding protein.	ABC transporter, permease protein.	0.921
BAV0678	BAV1867	BAV0678	BAV1867	Amino acid ABC transporter, atp-binding protein.	ABC transporter, solute-binding protein.	0.798
BAV0678	aapM	BAV0678	BAV3056	Amino acid ABC transporter, atp-binding protein.	L-amino acid ABC transporter, permease protein.	0.857
BAV0678	glnP	BAV0678	BAV1959	Amino acid ABC transporter, atp-binding protein.	Glutamine ABC transporter, permease protein; Start codon not provided.	0.900
BAV0679	BAV0678	BAV0679	BAV0678	Amino acid ABC transporter, permease protein.	Amino acid ABC transporter, atp-binding protein.	0.972
BAV0679	BAV0680	BAV0679	BAV0680	Amino acid ABC transporter, permease protein.	Amino acid ABC transporter, permease protein.	0.861
BAV0679	BAV0898	BAV0679	BAV0898	Amino acid ABC transporter, permease protein.	Putative amino acid ABC transporter, permease component (pseudogene); Unassigned protein domain.	0.876
BAV0679	BAV1865	BAV0679	BAV1865	Amino acid ABC transporter, permease protein.	ABC-transporter, ATP-binding protein.	0.878
BAV0679	BAV1866	BAV0679	BAV1866	Amino acid ABC transporter, permease protein.	ABC transporter, permease protein.	0.491
BAV0679	BAV1867	BAV0679	BAV1867	Amino acid ABC transporter, permease protein.	ABC transporter, solute-binding protein.	0.823
BAV0679	aapM	BAV0679	BAV3056	Amino acid ABC transporter, permease protein.	L-amino acid ABC transporter, permease protein.	0.642
BAV0679	aapP	BAV0679	BAV3055	Amino acid ABC transporter, permease protein.	L-amino acid ABC transporter, ATP-binding protein.	0.873
BAV0679	glnP	BAV0679	BAV1959	Amino acid ABC transporter, permease protein.	Glutamine ABC transporter, permease protein; Start codon not provided.	0.533
BAV0679	glnQ	BAV0679	BAV1958	Amino acid ABC transporter, permease protein.	Glutamine ABC transporter, ATP-binding protein.	0.877
BAV0680	BAV0678	BAV0680	BAV0678	Amino acid ABC transporter, permease protein.	Amino acid ABC transporter, atp-binding protein.	0.969
BAV0680	BAV0679	BAV0680	BAV0679	Amino acid ABC transporter, permease protein.	Amino acid ABC transporter, permease protein.	0.861
BAV0680	BAV0898	BAV0680	BAV0898	Amino acid ABC transporter, permease protein.	Putative amino acid ABC transporter, permease component (pseudogene); Unassigned protein domain.	0.876
BAV0680	BAV1865	BAV0680	BAV1865	Amino acid ABC transporter, permease protein.	ABC-transporter, ATP-binding protein.	0.880