STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1869Putative signaling protein; Start codon not provided. (519 aa)    
Predicted Functional Partners:
BAV1003
Putative signaling protein.
 
   
 0.919
BAV3025
Putative signaling protein.
   
 0.810
BAV2132
Putative signaling membrane protein.
 
   
 0.791
BAV1239
Putative signaling protein.
   
 0.790
BAV1754
Putative signaling protein.
  
   
 0.786
BAV2681
Putative signaling protein.
 
   
 0.784
BAV1188
Putative signaling protein.
 
   
 0.774
BAV2133
Putative signaling protein.
 
   
 0.774
wspR
Putative signaling/response regulator protein.
 
   
 0.745
BAV2324
Putative metal-dependent phosphohydrolase.
  
   
 0.633
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.