STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1874Putative response regulator. (399 aa)    
Predicted Functional Partners:
BAV1003
Putative signaling protein.
 
 0.994
wlbJK
Putative membrane protein.
  
 
 0.984
BAV2681
Putative signaling protein.
 
 0.983
bvgS
Virulence sensor protein; Start codon not provided.
 
 
 0.973
wspR
Putative signaling/response regulator protein.
 
 0.968
BAV0353
Methyl-accepting-chemotaxis-protein.
 
 
 0.945
BAV0789
Chemotaxis sensory transducer.
 
 
 0.945
BAV1789
Putative signaling protein; Its C-terminal region is similar to the C-terminal region of Pseudomonas putida regulator MorA.
 
  
0.939
BAV1703
Methyl-accepting chemotaxis protein; Start codon not provided.
  
 
 0.937
BAV3025
Putative signaling protein.
 
 0.926
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.