STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFHigh-affinity branched-chain amino acid ABC transporter, ATP-binding protein. (233 aa)    
Predicted Functional Partners:
livM
High-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.972
livH
High-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.962
livJ1
High-affinity branched-chain amino acid ABC transporter, leu/ile/val-binding protein; Also similar to BAV1903 (59.299 38d).
 
  
 0.908
livG
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
0.884
BAV2834
ABC transporter, permease protein; Start codon not provided; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
BAV0981
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.843
BAV3031
ABC-transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.831
BAV0288
Putative branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.810
BAV2833
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.809
BAV0948
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.807
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.