STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsFerritin-like DNA-binding protein; Belongs to the Dps family. (166 aa)    
Predicted Functional Partners:
clpS
ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.691
BAV0850
Putative membrane protein.
  
    0.649
BAV1906
Hypothetical protein; No significant database matches.
       0.587
betB
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.585
betA
Choline dehydrogenase.
       0.581
BAV1098
Putative flavodoxin.
  
  
 0.573
BAV1909
Putative exported protein.
       0.566
BAV3155
Probable sigma(54) modulation protein.
  
    0.542
ohr
Organic hydroperoxide resistance protein.
  
  
 0.538
actP
Copper-transporting P-type ATPase.
  
  
 0.530
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.