BAV1910 protein (Bordetella avium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BAV1910

ABC transporter, permease protein. (269 aa)

Predicted Functional Partners:

BAV1911

0.955

BAV1909

0.948

BAV0739

0.837

BAV3382

0.787

BAV1991

0.777

BAV1912

0.773

BAV1990

0.773

BAV0643

0.764

BAV2580

0.761

BAV0645

0.750

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BAV0643	BAV0645	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein.	0.888
BAV0643	BAV0739	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein.	0.572
BAV0643	BAV1909	ABC transporter, substrate binding protein.	Putative exported protein.	0.689
BAV0643	BAV1910	ABC transporter, substrate binding protein.	ABC transporter, permease protein.	0.764
BAV0643	BAV1911	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein.	0.506
BAV0643	BAV1991	ABC transporter, substrate binding protein.	ABC-transporter, ATP-binding protein.	0.482
BAV0643	BAV3382	ABC transporter, substrate binding protein.	ABC transporter, ATP-binding protein.	0.470
BAV0645	BAV0643	ABC transporter, ATP-binding protein.	ABC transporter, substrate binding protein.	0.888
BAV0645	BAV1909	ABC transporter, ATP-binding protein.	Putative exported protein.	0.464
BAV0645	BAV1910	ABC transporter, ATP-binding protein.	ABC transporter, permease protein.	0.750
BAV0645	BAV1990	ABC transporter, ATP-binding protein.	ABC transporter, substrate-binding protein.	0.559
BAV0645	BAV2580	ABC transporter, ATP-binding protein.	Putative ABC transporter, substrate binding protein.	0.520
BAV0739	BAV0643	ABC transporter, ATP-binding protein.	ABC transporter, substrate binding protein.	0.572
BAV0739	BAV1909	ABC transporter, ATP-binding protein.	Putative exported protein.	0.536
BAV0739	BAV1910	ABC transporter, ATP-binding protein.	ABC transporter, permease protein.	0.837
BAV0739	BAV1990	ABC transporter, ATP-binding protein.	ABC transporter, substrate-binding protein.	0.669
BAV0739	BAV2580	ABC transporter, ATP-binding protein.	Putative ABC transporter, substrate binding protein.	0.629
BAV1909	BAV0643	Putative exported protein.	ABC transporter, substrate binding protein.	0.689
BAV1909	BAV0645	Putative exported protein.	ABC transporter, ATP-binding protein.	0.464
BAV1909	BAV0739	Putative exported protein.	ABC transporter, ATP-binding protein.	0.536