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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1915Probable dioxygenase. (373 aa)    
Predicted Functional Partners:
nagL
Maleylpyruvate isomerase (glutathione S-transferase).
 
  
 0.939
BAV1914
Conserved hypothetical protein.
 
     0.933
maaI
Maleylacetoacetate isomerase (glutathione-S-transferase).
 
  
 0.933
phnG
1-hydroxy-2-naphthoate dioxygenase; Start codon not provided.
  
  
 
0.926
nagI
Gentisate 1,2-dioxygenase.
  
  
 
0.920
BAV1913
Putative translation-inhibition endoribonuclease.
 
     0.784
BAV1912
Glutathione S-transferase; Belongs to the GST superfamily.
 
   
 0.717
BAV1909
Putative exported protein.
 
     0.706
BAV1787
Salicylate hydroxylase.
 
   
 0.692
BAV1910
ABC transporter, permease protein.
       0.635
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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