STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1951Putative lipoprotein. (421 aa)    
Predicted Functional Partners:
BAV0792
Putative membrane protein; Start codon not provided.
  
     0.699
BAV2739
4,5-dihydroxyphthalate decarboxylase.
  
     0.619
BAV0983
ABC transporter, substrate-binding protein.
  
     0.600
BAV0798
Putative exported protein; Start codon not provided.
  
     0.596
BAV0795
Conserved hypothetical protein; Start codon not provided.
  
     0.586
amn
Nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
       0.578
BAV0976
Probable hydrolase.
  
     0.570
srfC
Putative virulence factor.
  
     0.562
BAV0796
Putative ABC transporter, transmembrane protein.
  
     0.531
BAV0975
GntR-family transcriptional regulator.
  
     0.520
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.