STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2012Conserved hypothetical protein. (173 aa)    
Predicted Functional Partners:
BAV2013
Conserved hypothetical protein.
       0.782
glpD
Glycerol-3-phosphate dehydrogenase.
  
  
 0.707
BAV0495
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0496, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
     0.623
BAV0496
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0495, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
     0.610
glpR
Glycerol-3-phosphate regulon repressor.
     
 0.608
BAV1777
One of 11 fimbrial subunits.
  
     0.553
BAV2014
Putative exported protein.
       0.510
BAV0754
Conserved hypothetical protein.
  
     0.489
fhaD
Fimbrial chaperone protein.
  
 
   0.472
BAV2248
Conserved hypothetical protein.
  
     0.454
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.