STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2023Putative component of multidrug efflux system. (70 aa)    
Predicted Functional Partners:
BAV2022
Putative multidrug efflux protein.
 
   
 0.961
BAV2024
Multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.933
slyA
MarR-family transcriptional regulator.
 
     0.932
BAV2025
Outer membrane multidrug efflux protein.
 
     0.800
BAV3242
Probable transporter (partial); Partial CDS. Similar to the C-terminal region of many transporters.
  
   
 0.452
bhuR
Outer membrane TonB-dependent heme receptor.
  
    0.439
BAV2020
Conserved hypothetical protein; Start codon not provided.
       0.432
virB6
Probable conjugal transfer protein.
  
     0.429
BAV1210
Putative membrane protein; Start codon not provided.
  
     0.420
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.