STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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[Homology]
Score
hmpFlavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. (408 aa)    
Predicted Functional Partners:
BAV2031
Conserved hypothetical protein.
 
   
 0.929
BAV0262
Putative bifunctional protein: include phospholipase and oxidoreductase.
  
  
 0.669
BAV0660
Putative ferredoxin reductase.
  
  
 0.669
BAV2072
Putative ferredoxin reductase.
  
  
 0.669
BAV2367
Probable hydroxylase.
 
  
 0.636
BAV2256
Hemoglobin-like protein.
     
 0.583
wlbJK
Putative membrane protein.
  
  
 0.575
BAV2033
Conserved hypothetical protein.
       0.536
cyoC
Cytochrome O ubiquinol oxidase subunit III.
 
  
 0.527
gltB
Glutamate synthase [NADPH] large chain precursor.
      
 0.522
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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