STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2040Putative iron-regulated membrane protein. (388 aa)    
Predicted Functional Partners:
BAV2041
Putative membrane protein.
  
    0.790
bfrB
Putative ferric siderophore receptor.
 
  
 0.769
BAV0779
Putative bacterioferritin; Belongs to the Dps family.
  
     0.598
BAV0634
Ferric-siderophore receptor.
 
  
 0.542
pphA
Serine/threonine protein phosphatase.
       0.533
BAV1212
Putative membrane protein.
 
    0.505
BAV0152
TonB-dependent receptor protein.
 
   
 0.475
dps
Ferritin-like DNA-binding protein; Belongs to the Dps family.
  
     0.453
BAV2042
Putative membrane protein.
       0.427
piuA
Hydroxamate-type ferrisiderophore receptor.
 
  
 0.426
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.