STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2079Putative exported protein. (192 aa)    
Predicted Functional Partners:
BAV2077
Putative lipoprotein.
 
   
 0.953
BAV2075
Putative isomerase; Weakly similar to steroid delta-isomerases from Nocardioides simplex and Pseudomonas putida.
 
     0.937
BAV2078
Putative transporter.
 
     0.937
BAV2076
Putative short-chain dehydrogenase; Start codon not provided.
 
     0.928
BAV2081
Conserved hypothetical protein.
 
     0.876
BAV2082
Putative dehydrogenase.
 
     0.859
cfa
Putative cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.826
slyX
Protein SlyX.
  
     0.507
BAV0159
Conserved hypothetical protein.
  
     0.484
BAV0355
MerR-family transcriptional regulator.
 
     0.437
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.