STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV2090Putative peptidase inhibitor; Start codon not provided. (1704 aa)    
Predicted Functional Partners:
pbpC
Penicillin-binding protein 1C.
 
   
 0.974
clpA
ATP-dependent clp protease ATP-binding (chaperone); Start codon not provided; Belongs to the ClpA/ClpB family.
  
    0.604
pqiA
Paraquat-inducible protein A.
       0.579
BAV2085
Putative lipoprotein.
       0.511
pqiB
Putative paraquat-inducible protein B.
       0.511
clpS
ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.491
BAV0495
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0496, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
     0.450
BAV2849
Conserved hypothetical protein.
  
     0.423
BAV0496
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0495, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
     0.414
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.