cspD protein (Bordetella avium) - STRING interaction network

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Score

cspD

Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424. (81 aa)

Predicted Functional Partners:

clpS

0.612

BAV2093

0.580

rpsL

0.503

rpsQ

0.494

rpsS

0.472

rplW

0.468

rpmC

0.463

rplO

0.448

clpA

0.437

rpmE2

0.429

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV2093	clpS	BAV2093	BAV2091	Putative exported protein.	ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.408
BAV2093	cspD	BAV2093	BAV2092	Putative exported protein.	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	0.580
clpA	clpS	BAV2088	BAV2091	ATP-dependent clp protease ATP-binding (chaperone); Start codon not provided; Belongs to the ClpA/ClpB family.	ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.956
clpA	cspD	BAV2088	BAV2092	ATP-dependent clp protease ATP-binding (chaperone); Start codon not provided; Belongs to the ClpA/ClpB family.	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	0.437
clpS	BAV2093	BAV2091	BAV2093	ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	Putative exported protein.	0.408
clpS	clpA	BAV2091	BAV2088	ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	ATP-dependent clp protease ATP-binding (chaperone); Start codon not provided; Belongs to the ClpA/ClpB family.	0.956
clpS	cspD	BAV2091	BAV2092	ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	0.612
cspD	BAV2093	BAV2092	BAV2093	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	Putative exported protein.	0.580
cspD	clpA	BAV2092	BAV2088	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	ATP-dependent clp protease ATP-binding (chaperone); Start codon not provided; Belongs to the ClpA/ClpB family.	0.437
cspD	clpS	BAV2092	BAV2091	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	ATP-dependent clp protease adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.612
cspD	rplO	BAV2092	BAV0053	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.448
cspD	rplW	BAV2092	BAV0027	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.468
cspD	rpmC	BAV2092	BAV0033	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.463
cspD	rpmE2	BAV2092	BAV2408	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	50S ribosomal protein L31 type B-1; Belongs to the bacterial ribosomal protein bL31 family.	0.429
cspD	rpsL	BAV2092	BAV0020	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.503
cspD	rpsQ	BAV2092	BAV0034	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.494
cspD	rpsS	BAV2092	BAV0029	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.472
rplO	cspD	BAV0053	BAV2092	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Cold shock-like protein; Also similar to BAV1492, BAV1494, BAV2327 and BAV3424.	0.448
rplO	rplW	BAV0053	BAV0027	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.996
rplO	rpmC	BAV0053	BAV0033	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.993