Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAV2130 | BAV2131 | BAV2130 | BAV2131 | LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | 0.599 |
| BAV2131 | BAV2130 | BAV2131 | BAV2130 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.599 |
| BAV2131 | gcvP | BAV2131 | BAV0493 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.529 |
| BAV2131 | gdhA | BAV2131 | BAV1836 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.647 |
| BAV2131 | gdhA-2 | BAV2131 | BAV3182 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.647 |
| BAV2131 | gltB | BAV2131 | BAV3291 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | Glutamate synthase [NADPH] large chain precursor. | 0.961 |
| BAV2131 | gltD | BAV2131 | BAV3292 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | Glutamate synthase [NADPH] small chain. | 0.985 |
| BAV2131 | guaA | BAV2131 | BAV1568 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.545 |
| BAV2131 | pheT | BAV2131 | BAV2066 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.437 |
| BAV2131 | polA | BAV2131 | BAV2388 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.442 |
| BAV2131 | wlbJK | BAV2131 | BAV0091 | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | Putative membrane protein. | 0.494 |
| gcvP | BAV2131 | BAV0493 | BAV2131 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putative membrane protein; Similar to an internal region of the large subunit of ferredoxin-dependent glutamate synthase from many organisms. | 0.529 |
| gcvP | gdhA | BAV0493 | BAV1836 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.889 |
| gcvP | gdhA-2 | BAV0493 | BAV3182 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.889 |
| gcvP | gltB | BAV0493 | BAV3291 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase [NADPH] large chain precursor. | 0.929 |
| gcvP | gltD | BAV0493 | BAV3292 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase [NADPH] small chain. | 0.817 |
| gcvP | guaA | BAV0493 | BAV1568 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.644 |
| gcvP | pheT | BAV0493 | BAV2066 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.405 |
| gcvP | polA | BAV0493 | BAV2388 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.547 |
| gcvP | wlbJK | BAV0493 | BAV0091 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Putative membrane protein. | 0.809 |
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