STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pncAPyrazinamidase/nicotinamidase. (213 aa)    
Predicted Functional Partners:
pncB
Pututative nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
 
 
 0.978
iorA
Isoquinoline 1-oxidoreductase alpha subunit.
    
  0.906
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
    
  0.902
BAV1527
Probable aldehyde dehydrogenase.
     
  0.900
speG
Spermidine N(1)-acetyltransferase.
       0.718
BAV2137
Putative membrane protein.
  
    0.688
BAV2134
Putative outer membrane protein.
       0.574
pbpC
Penicillin-binding protein 1C.
   
    0.513
mrp
Putative amidase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
    0.504
BAV1238
Putative lytic murein transglycosylase.
  
    0.413
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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