Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAV0205 | BAV1110 | BAV0205 | BAV1110 | Putative phosphatase. | Probable hydrolase. | 0.915 |
BAV0205 | BAV2205 | BAV0205 | BAV2205 | Putative phosphatase. | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | 0.904 |
BAV0205 | glcD1 | BAV0205 | BAV2151 | Putative phosphatase. | Glycolate oxidase subunit; Also similar to the upstream CDS, BAV2152, (30.947 identity). | 0.902 |
BAV0205 | glcE | BAV0205 | BAV2150 | Putative phosphatase. | Glycolate oxidase subunit. | 0.902 |
BAV0205 | glcF | BAV0205 | BAV2149 | Putative phosphatase. | Glycolate oxidase iron-sulfur subunit. | 0.902 |
BAV0205 | gph-2 | BAV0205 | BAV3234 | Putative phosphatase. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.945 |
BAV1110 | BAV0205 | BAV1110 | BAV0205 | Probable hydrolase. | Putative phosphatase. | 0.915 |
BAV1110 | BAV2205 | BAV1110 | BAV2205 | Probable hydrolase. | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | 0.904 |
BAV1110 | glcD1 | BAV1110 | BAV2151 | Probable hydrolase. | Glycolate oxidase subunit; Also similar to the upstream CDS, BAV2152, (30.947 identity). | 0.905 |
BAV1110 | glcE | BAV1110 | BAV2150 | Probable hydrolase. | Glycolate oxidase subunit. | 0.903 |
BAV1110 | glcF | BAV1110 | BAV2149 | Probable hydrolase. | Glycolate oxidase iron-sulfur subunit. | 0.902 |
BAV1110 | gph-2 | BAV1110 | BAV3234 | Probable hydrolase. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.920 |
BAV2205 | BAV0205 | BAV2205 | BAV0205 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Putative phosphatase. | 0.904 |
BAV2205 | BAV1110 | BAV2205 | BAV1110 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Probable hydrolase. | 0.904 |
BAV2205 | glcB | BAV2205 | BAV0105 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.907 |
BAV2205 | glcD1 | BAV2205 | BAV2151 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Glycolate oxidase subunit; Also similar to the upstream CDS, BAV2152, (30.947 identity). | 0.904 |
BAV2205 | glcE | BAV2205 | BAV2150 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Glycolate oxidase subunit. | 0.904 |
BAV2205 | glcF | BAV2205 | BAV2149 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Glycolate oxidase iron-sulfur subunit. | 0.900 |
BAV2205 | gph-2 | BAV2205 | BAV3234 | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.904 |
glcB | BAV2205 | BAV0105 | BAV2205 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | Putative 2-hydroxyacid dehydrogenase; Start codon not provided. | 0.907 |
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