STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV2165Conserved hypothetical protein. (153 aa)    
Predicted Functional Partners:
BAV2166
Putative antioxidant protein.
  
    0.872
BAV2763
Conserved hypothetical protein.
  
     0.686
bioC
Conserved hypothetical protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
     0.676
BAV2710
Conserved hypothetical protein.
  
     0.661
BAV2167
Conserved hypothetical protein.
       0.633
BAV1521
Conserved hypothetical protein.
 
     0.616
thrC
Threonine synthase.
       0.603
hom
Homoserine dehydrogenase.
       0.603
BAV0170
Conserved hypothetical protein; Start codon not provided.
  
     0.584
BAV2164
Putative aminotransferase.
       0.554
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.