STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2165Conserved hypothetical protein. (153 aa)    
Predicted Functional Partners:
BAV2166
Putative antioxidant protein.
  
    0.890
BAV2763
Conserved hypothetical protein.
  
     0.686
bioC
Conserved hypothetical protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
     0.676
BAV2710
Conserved hypothetical protein.
  
     0.661
BAV2167
Conserved hypothetical protein.
       0.640
BAV1521
Conserved hypothetical protein.
 
     0.586
BAV0170
Conserved hypothetical protein; Start codon not provided.
  
     0.584
hom
Homoserine dehydrogenase.
       0.568
thrC
Threonine synthase.
       0.567
BAV2164
Putative aminotransferase.
       0.562
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.