STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2182Putative thiosulfate sulfurtransferase. (280 aa)    
Predicted Functional Partners:
metC
Cystathionine beta-lyase; Previously sequenced as Bordetella avium cystathionine beta-lyase metC SWALL:METC_BORAV (SWALL:Q07703) (395 aa).
 
 
 0.928
cysA
Putative thiosulfate sulfurtransferase.
  
  
 
0.927
iscS
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
 0.918
cysI
Putative sulfite reductase.
    
 0.917
ssuE
FMN reductase; Start codon not provided.
  
  
  0.912
ldh
L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
     
  0.900
BAV2183
Probable membrane protein.
       0.800
htpX
Probable protease (heat shock protein); Belongs to the peptidase M48B family.
       0.543
wlbJK
Putative membrane protein.
  
  
 0.413
dsbE
Thiol:disulfide interchange protein.
 
  
 0.410
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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