STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV2188Putative membrane protein. (285 aa)    
Predicted Functional Partners:
marR
Multiple antibiotic resistance protein.
       0.616
BAV2187
Putative membrane protein.
       0.552
qor
Quinone oxidoreductase.
       0.505
dsbB
Disulfide bond formation protein B.
  
    0.494
BAV3335
Putative membrane protein.
  
     0.432
BAV2190
Outer membrane multidrug efflux protein.
       0.406
emrA
Multidrug resistance protein A.
       0.402
emrB
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
       0.402
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.