STRINGSTRING
emrA protein (Bordetella avium) - STRING interaction network
"emrA" - annotation not available in Bordetella avium
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrAannotation not available (395 aa)    
Predicted Functional Partners:
emrB
annotation not available (528 aa)
 
 
  0.990
BAV2190
annotation not available (474 aa)
 
 
  0.965
marR
annotation not available (166 aa)
 
 
  0.763
BAV2460
annotation not available (508 aa)
 
 
  0.524
BAV1655
annotation not available (487 aa)
 
 
  0.523
BAV2025
annotation not available (479 aa)
 
 
  0.523
BAV1812
annotation not available (472 aa)
 
 
  0.515
BAV3040
annotation not available (478 aa)
 
 
  0.474
BAV2188
annotation not available (285 aa)
              0.471
tolC
annotation not available (441 aa)
   
 
  0.467
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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