STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctAAerobic c4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (445 aa)    
Predicted Functional Partners:
BAV0278
Putative transport protein; Start codon not provided; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.773
dctB
Two component sensor kinase for C4-dicarboxylate transport; Start codon not provided.
 
   
 0.578
dctD
Two component response regulator for C4-dicarboxylate transport.
     
 0.493
sdhD
Succinate dehydrogenase hydrophobic membrane anchor subunit.
   
  
 0.484
wlbJK
Putative membrane protein.
     
 0.478
BAV2217
Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.).
       0.475
bvgS
Virulence sensor protein; Start codon not provided.
  
  
 0.473
gltB
Glutamate synthase [NADPH] large chain precursor.
     
 0.470
BAV2214
Conserved hypothetical protein.
       0.467
BAV2215
DNA-3-methyladenine glycosylase.
       0.467
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.