STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctBTwo component sensor kinase for C4-dicarboxylate transport; Start codon not provided. (642 aa)    
Predicted Functional Partners:
dctD
Two component response regulator for C4-dicarboxylate transport.
 0.995
wlbJK
Putative membrane protein.
  
 
 0.851
bvgS
Virulence sensor protein; Start codon not provided.
  
 
 0.696
flgD
Basal-body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.672
BAV1661
Two-component response regulator.
 
 
 0.609
dctA
Aerobic c4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.577
BAV2275
Two-component sensor kinase.
 
   
 0.518
BAV2907
Two-component sensor kinase.
  
 
 
 0.513
BAV0099
Two-component response regulator.
  
 
 
 0.430
BAV1874
Putative response regulator.
  
 
 0.403
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.