STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV2248Conserved hypothetical protein. (229 aa)    
Predicted Functional Partners:
BAV1835
Putative lipoprotein.
  
 0.809
BAV2171
Conserved hypothetical protein; Start codon not provided.
 
 
 
 0.807
dltD
Putative D-alanine transferase.
  
     0.772
BAV2363
Type IV pilus assembly protein.
  
     0.753
BAV1825
Conserved hypothetical protein.
  
 
 0.726
BAV0691
Putative membrane protein.
  
     0.725
BAV1826
Putative membrane protein; No significant similarity outside the bordetellae.
  
     0.724
BAV2827
Multidrug resistance protein; Start codon not provided.
  
     0.708
BAV3287
Putative membrane protein; Start codon not provided.
  
     0.699
BAV0476
Putative exported protein.
  
    0.675
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.